Source code for pvp.common.values

from collections import OrderedDict as odict
from enum import Enum, auto
import typing

# TODO: Zhenyu's job is to make sure the print value is an intepretable string
[docs]class ValueName(Enum): #Setting that are likely important for future adjustements PIP = auto() # PIP pressure PIP_TIME = auto() # time to reach PIP PEEP = auto() # PEEP pressure PEEP_TIME = auto() # time to reach PEEP BREATHS_PER_MINUTE = auto() INSPIRATION_TIME_SEC = auto() IE_RATIO = auto() #Settings that are read out, but can not be controlled by software FIO2 = auto() VTE = auto() PRESSURE = auto() FLOWOUT = auto()
[docs]class Value(object):
[docs] def __init__(self, name: str, units: str, abs_range: tuple, safe_range: tuple, decimals: int, control: bool, sensor: bool, display: bool, plot: bool = False, plot_limits: typing.Union[None, typing.Tuple[ValueName]] = None, control_type: typing.Union[None, str] = None, group: typing.Union[None, dict] = None, default: (int, float) = None): """ Definition of a value. Used by the GUI and control module to set defaults. Args: name (str): Human-readable name of the value units (str): Human-readable description of units abs_range (tuple): tuple of ints or floats setting the logical limit of the value, eg. a percent between 0 and 100, (0, 100) safe_range (tuple): tuple of ints or floats setting the safe ranges of the value, note:: this is not the same thing as the user-set alarm values, though the user-set alarm values are initialized as ``safe_range``. decimals (int): the number of decimals of precision used when displaying the value display (bool): whether the value should be displayed in the monitor. if ``control == True``, automatically set to ``False`` because all controls have their own numerical displays plot (bool): whether or not the value is plottable int he center plot window plot_limits (None, tuple(ValueName)): If plottable, and the plotted value has some alarm limits for another value, plot those limits as horizontal lines in the plot. eg. the PIP alarm range limits should be plotted on the Pressure plot """ self._name = None self._units = None self._abs_range = None self._safe_range = None self._decimals = None self._default = None self._control = None self._sensor = None self._display = None self._control_type = None self._group = None self._plot = None self._plot_limits = None self.name = name self.units = units self.abs_range = abs_range self.safe_range = safe_range self.decimals = decimals self.control = control self.sensor = sensor self.display = display self.control_type = control_type self.group = group self.plot = plot self.plot_limits = plot_limits if default is not None: self.default = default
@property def name(self) -> str: return self._name @name.setter def name(self, name): assert(isinstance(name, str)) self._name = name @property def abs_range(self) -> tuple: return self._abs_range @abs_range.setter def abs_range(self, abs_range): assert(isinstance(abs_range, tuple) or isinstance(abs_range, list)) assert(all([isinstance(x, int) or isinstance(x, float) for x in abs_range])) self._abs_range = abs_range @property def safe_range(self) -> tuple: return self._safe_range @safe_range.setter def safe_range(self, safe_range): assert(isinstance(safe_range, tuple) or isinstance(safe_range, list) or safe_range is None) if isinstance(safe_range, tuple) or isinstance(safe_range, list): assert(all([isinstance(x, int) or isinstance(x, float) for x in safe_range])) self._safe_range = safe_range @property def decimals(self) -> int: return self._decimals @decimals.setter def decimals(self, decimals): assert(isinstance(decimals, int)) self._decimals = decimals @property def default(self): return self._default @default.setter def default(self, default): assert(isinstance(default, int) or isinstance(default, float)) self._default = default @property def control(self): return self._control @control.setter def control(self, control): assert(isinstance(control, bool)) self._control = control @property def sensor(self): return self._sensor @sensor.setter def sensor(self, sensor): assert(isinstance(sensor, bool)) self._sensor = sensor @property def display(self): return self._display @display.setter def display(self, display): assert(isinstance(display, bool)) self._display = display @property def control_type(self): return self._control_type @control_type.setter def control_type(self, control_type): assert(control_type is None or control_type in ('record', 'slider')) self._control_type = control_type @property def group(self): return self._group @group.setter def group(self, group): assert(group is None or isinstance(group, dict)) if isinstance(group, dict): assert(len(group) == 1 and all([isinstance(k, int) for k in group.keys()])) self._group = group @property def plot(self): return self._plot @plot.setter def plot(self, plot): assert(isinstance(plot, bool)) self._plot = plot @property def plot_limits(self): return self._plot_limits @plot_limits.setter def plot_limits(self, plot_limits): assert plot_limits is None or isinstance(plot_limits, tuple) if isinstance(plot_limits, tuple): assert all([isinstance(x, ValueName) for x in plot_limits]) self._plot_limits = plot_limits def __setitem__(self, key, value): self.__setattr__(key, value) def __getitem__(self, key): return self.__getattribute__(key)
[docs] def to_dict(self): return { 'name': self.name, 'units': self.units, 'abs_range': self.abs_range, 'safe_range': self.safe_range, 'decimals': self.decimals, 'default': self.default, 'control': self.control, 'sensor': self.sensor, 'plot': self.plot, 'plot_limits': self.plot_limits, 'control_type': self.control_type, 'group': self.group }
VALUES = odict({ ValueName.PIP: Value(**{ 'name': 'PIP', # (Peak Inspiratory Pressure) 'units': 'cmH2O', 'abs_range': (0, 70), # FIXME 'safe_range': (0, 40), # From DrDan https://tigervents.slack.com/archives/C011MRVJS7L/p1588190130492300 'default': 35, # FIXME 'decimals': 1, 'control': True, 'control_type': 'slider', 'group': {0:'Pressure Controls'}, 'sensor': True, 'display': True }), ValueName.PEEP: Value(**{ 'name': 'PEEP', # (Positive End Expiratory Pressure) 'units': 'cmH2O', 'abs_range': (0, 20), # FIXME 'safe_range': (0, 16), # From DrDan https://tigervents.slack.com/archives/C011MRVJS7L/p1588190130492300 'default': 5, # FIXME 'decimals': 1, 'control': True, 'control_type': 'record', 'group': {0:'Pressure Controls'}, 'sensor': True, 'display': True }), ValueName.BREATHS_PER_MINUTE: Value(**{ 'name': 'RR', # Daniel re: FDA labels 'units': 'BPM', # Daniel re: FDA labels 'abs_range': (0, 50), # FIXME 'safe_range': (10, 30), # Stanford's socs https://www.vent4us.org/technical 'default': 17, # FIXME 'decimals': 1, 'control': True, 'control_type': 'slider', 'sensor': True, 'display': True }), ValueName.INSPIRATION_TIME_SEC: Value(**{ 'name': 'INSPt', 'units': 'seconds', 'abs_range': (0, 5), # FIXME 'safe_range': (1, 3.0), # FIXME 'default': 1.0, # FIXME 'decimals': 1, 'control': True, 'control_type': 'slider', 'sensor': True, 'display': True }), ValueName.IE_RATIO: Value(**{ 'name': 'I:E', 'units': '', 'abs_range': (0, 2), 'safe_range': (1, 1.3), 'decimals': 2, 'default':0.5, 'control': True, 'control_type': 'slider', 'sensor': False, 'display': True }), ValueName.PIP_TIME: Value(**{ 'name': 'flow', 'units': '', 'abs_range': (1, 5), # FIXME 'safe_range': (1, 5), # FIXME 'default': 1, # FIXME 'decimals': 1, 'control': True, 'control_type': 'slider', 'sensor': False, 'display': True }), ValueName.PEEP_TIME: Value(**{ 'name': 'PEEPt', 'units': 'seconds', 'abs_range': (0, 2), # FIXME 'safe_range': (0, 1.0), # FIXME 'default': 0.5, # FIXME 'decimals': 1, 'control': True, 'sensor': False, 'display': False }), ValueName.PRESSURE: Value(**{ 'name': 'Pressure', 'units': 'cmH2O', 'abs_range': (0,70), 'safe_range': (0,60), 'decimals': 1, 'control': False, 'sensor': True, 'display': True, 'plot': True, 'plot_limits': (ValueName.PIP, ValueName.PEEP) }), ValueName.VTE: Value(**{ 'name': 'VTE', 'units': 'L', # Unit is liters :-) 'abs_range': (0, 100), 'safe_range': (0, 100), 'decimals': 2, 'control': False, 'control_type': 'record', 'sensor': True, 'display': True }), ValueName.FLOWOUT: Value(**{ 'name': 'Flow', 'units': 'L/min', 'abs_range': (0, 2), 'safe_range': (0, 2), 'decimals': 2, 'control': False, 'sensor': True, 'display': True, 'plot': True }), ValueName.FIO2: Value(**{ 'name': 'FiO2', 'units': '%', 'abs_range': (0, 100), 'safe_range': (20, 100), 'decimals': 1, 'control': False, 'sensor': True, 'display': True, 'plot': True }), }) SENSOR = odict({ k:v for k, v in VALUES.items() if v.sensor }) """ Values to monitor but not control. Used to set alarms for out-of-bounds sensor values. These should be sent from the control module and not computed.:: { 'name' (str): Human readable name, 'units' (str): units string, (like degrees or %), 'abs_range' (tuple): absolute possible range of values, 'safe_range' (tuple): range outside of which a warning will be raised, 'decimals' (int): The number of decimals of precision this number should be displayed with } """ CONTROL = odict({ k: v for k, v in VALUES.items() if v.control }) """ Values to control but not monitor. Sent to control module to control operation of ventilator.:: { 'name' (str): Human readable name, 'units' (str): units string, (like degrees or %), 'abs_range' (tuple): absolute possible range of values, 'safe_range' (tuple): range outside of which a warning will be raised, 'default' (int, float): the default value of the parameter, 'decimals' (int): The number of decimals of precision this number should be displayed with } """ DISPLAY_MONITOR = odict({ k: v for k, v in VALUES.items() if v.sensor and v.display }) """ Values that should be displayed in the GUI. If a value is also a CONTROL it will always have the measured value displayed, these values are those that are sensor values that are uncontrolled and should be displayed. """ DISPLAY_CONTROL = odict({ k: v for k, v in VALUES.items() if v.control and v.display }) """ Values that should be displayed in the GUI. If a value is also a CONTROL it will always have the measured value displayed, these values are those that are sensor values that are uncontrolled and should be displayed. """ PLOTS = odict({ k: v for k, v in VALUES.items() if v.plot }) LIMITS = { } """ Values that are dependent on other values:: { "dependent_value": ( ['value_1', 'value_2'], callable_returning_boolean } } Where the first argument in the tuple is a list of the values that will be given as argument to the ``callable_returning_boolean`` which will return whether (``True``) or not (``False``) a value is allowed. """